| Protein ZmMADS69 | |
|---|---|
|
ZmMADS69 is a protein in the MADS family.
|
|
| Information | |
| TF Name: | ZmMADS69 |
| Species: | Maize |
| TF Family: | MADS |
| Gene Name(Synonym): | MADS69 |
| Uniprot ID: | B4FML1 |
Protein ZmMADS69
ZmMADS69 is a protein in the MADS family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF00319 | |
| Zm00001eb143080_T001 |  |
| Zm00001eb143080_T002 | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d042315 | DAPseq |  |
sequence | fimo | position |
| Zm00001d042315 | DAPseq |  |
sequence | fimo | position |
| Zm00001d042315 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d042315 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmMADS69 is the regulator
Interactions where ZmMADS69 is the target
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Zm00001eb143080_T001 from maize genome v5
Amino Acid Sequence
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MAPRGRVELRRIEDKASRQVRFSKRRAGLFKKAFELALLCDAEVALLVFSPGGKLYEYSSSSIEDTYDRYHQFAGAGRKV
NGHNNDNRDVAASDLQSRLKEIATWSKQNNAEESDANELEKLEELLTNALRNTKAKKMLAKENNGGAGASTSSQMLLYSA
ERATDK
MAPRGRVELRRIEDKASRQVRFSKRRAGLFKKAFELALLCDAEVALLVFSPGGKLYEYSSSSIEDTYDRYHQFAGAGRKV
NGHNNDNRDVAASDLQSRLKEIATWSKQNNAEESDANELEKLEELLTNALRNTKAKKMLAKENNGGAGASTSSQMLLYSA
ERATDK
MAPRGRVELRRIEDKASRQVRFSKRRAGLFKKAFELALLCDAEVALLVFSPGGKLYEYSSSSIEDTYDRYHQFAGAGRKV
NGHNNDNRDVAASDLQSRLKEIATWSKQNNAEESDANELEKLEELLTNALRNTKAKKMLAKENNGGAGASTSSQMLLYSA
ERATDK
MAPRGRVELRRIEDKASRQVRFSKRRAGLFKKAFELALLCDAEVALLVFSPGGKLYEYSSSSIEDTYDRYHQFAGAGRKV
NGHNNDNRDVAASDLQSRLKEIATWSKQNNAEESDANELEKLEELLTNALRNTKAKKMLAKENNGGAGASTSSQMLLYSA
ERATDK
MAPRGRVELRRIEDKASRQVRFSKRRAGLFKKAFELALLCDAEVALLVFSPGGKLYEYSSSSIEDTYDRYHQFAGAGRKV
NGHNNDNRDVAASDLQSRLKEIATWSKQNNAEESDANELEKLEELLTNALRNTKAKKMLAKENNGGAGASTSSQMLLYSA
ERATDK
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00319 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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GCAGAGCGACGAGCGACGAGCTAAA...
GCAGAGCGACGAGCGACGAGCTAAACCCCGACCGAGTCGCTGCTTGGGTGCCCAAGATAGCCCTACCGCCTCGCCTCTCTCGTTCCCCCTCATCGCCACGCCAGTCGCCTCCACTCCCAGTCATCTCCCATCACCGACGACGTGTCGAGGCGAGAGAAGAGGGCGAGTCCAAGTCTAGGGTTCCCGCCGCATCGACACGGGCATCGCACCGCACCGCGAGGGGCGGGCACGGAGGAAGATGGCACCGCGCGGGCGCGTGGAGCTGCGGCGGATCGAGGACAAGGCGAGCCGGCAGGTGCGCTTCTCCAAGCGCCGCGCGGGGCTGTTCAAGAAGGCCTTCGAGCTGGCCCTGCTCTGCGACGCCGAGGTCGCGCTCCTCGTCTTTTCCCCCGGCGGCAAGCTCTATGAGTACTCCTCCTCCAGCATAGAAGATACATATGACCGCTATCATCAATTTGCGGGAGCAGGAAGAAAAGTGAACGGACATAACAACGATAACCGGGATGTAGCTGCTTCAGATTTACAGTCGAGACTTAAGGAGATCGCAACATGGTCTAAACAAAACAACGCTGAGGAGTCGGATGCCAATGAACTTGAGAAACTTGAGGAACTCCTGACAAATGCTTTGAGGAATACGAAAGCCAAAAAGATGTTGGCAAAAGAAAACAATGGTGGTGCCGGTGCAAGTACAAGCAGCCAGATGTTGCTTTACTCGGCAGAGCGTGCAACCGACAAATGAAACGGGGCGTGCATCTGTTGCTAACGGGGCGGTGCCGGTGCCGCATACTATTGTTGTGTAGCTGAGGTTTGTCAAGGTGGCTGCTGGCAAGGTTAGCCGAGGAAGTGGAGTTCAATAACAGGATGCGGAAACTGTGCCGCTCCTTGCCGAACTTAAGCCCCGTTACGTTGTCGCACAAAGTTTATTTCCTAGCACTGTGCTTGCTGCTTATGTTTGTTTGGATGTGCCAACCTGCAGTGACCCTCGTGGAGCCTGGGTCTCACGCTCCTCTTACCTAGTGTGATGTGCAGAAAAAGTGTGATGCTGTAAAATTATGTGATTGCCTAGCAGATGTCAAATTTTCAATCAGTAGCTAACTCCTTTTAATGGTACAGGCTTGCATGATTTCATCTGCAAAAAAGAGAGGGCGGGTTGGGTGTCAAATCTAGCCGGATGTTTTCGCAAGTTTGTGATAAAAATTGTGCTGTACA
GRMZM2G171650_T01 from maize genome v3
Amino Acid Sequence
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MAPRGRVELRRIEDKASRQVRFSKRRAGLFKKAFELALLCDAEVALLVFSPGGKLYEYSSSRTGM
Nucleotide Sequence
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GCAGAGCGACGAGCGACGAGCTAAA...
GCAGAGCGACGAGCGACGAGCTAAACCCCGACCGAGTCGCTGCTTGGGTGCCCAAGATAGCCCTACCGCCTCGCCTCTCTCGTTCCCCCTCATCGCCACGCCAGTCGCCTCCACTCCCAGTCATCTCCCATCACCGACGACGTGTCGAGGCGAGAGAAGAGGGCGAGTCCAAGTCTAGGGTTCCCGCCGCATCGACACGGGCATCGCACCGCACCGCGAGGGGCGGGCACGGAGGAAGATGGCACCGCGCGGGCGCGTGGAGCTGCGGCGGATCGAGGACAAGGCGAGCCGGCAGGTGCGCTTCTCCAAGCGCCGCGCGGGGCTGTTCAAGAAGGCCTTCGAGCTGGCCCTGCTCTGCGACGCCGAGGTCGCGCTCCTCGTCTTTTCCCCCGGCGGCAAGCTCTATGAGTACTCCTCCTCCAGAACCGGGATGTAGCTGCTTCAGATTTACAGTCGAGACTTAAGGAGATCGCAACATGGTCTAAACAAAACAACGCTGAGGAGTCGGATGCCAATGAACTTGAGAAACTTGAGGAACTCCTGACAAATGCTTTGAGGAATACGAAAGCCAAAAAGGTACAGTAAAATGCCTTTCTTTTACTACGTCATGTATCGTTGCGGCTGATGATTTAGATAGAGATCTCGCTCCAAAAACTTTTTGATACATTTTGTATTCCTATCCTGCGGACCAATTATTGCTACAATACTTTGGTGCA
GRMZM2G171650_T02 from maize genome v3
Amino Acid Sequence
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MAPRGRVELRRIEDKASRQVRFSKRRAGLFKKAFELALLCDAEVALLVFSPGGKLYEYSSSRTGM
Nucleotide Sequence
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GCAGAGCGACGAGCGACGAGCTAAA...
GCAGAGCGACGAGCGACGAGCTAAACCCCGACCGAGTCGCTGCTTGGGTGCCCAAGATAGCCCTACCGCCTCGCCTCTCTCGTTCCCCCTCATCGCCACGCCAGTCGCCTCCACTCCCAGTCATCTCCCATCACCGACGACGTGTCGAGGCGAGAGAAGAGGGCGAGTCCAAGTCTAGGGTTCCCGCCGCATCGACACGGGCATCGCACCGCACCGCGAGGGGCGGGCACGGAGGAAGATGGCACCGCGCGGGCGCGTGGAGCTGCGGCGGATCGAGGACAAGGCGAGCCGGCAGGTGCGCTTCTCCAAGCGCCGCGCGGGGCTGTTCAAGAAGGCCTTCGAGCTGGCCCTGCTCTGCGACGCCGAGGTCGCGCTCCTCGTCTTTTCCCCCGGCGGCAAGCTCTATGAGTACTCCTCCTCCAGAACCGGGATGTAGCTGCTTCAGATTTACAGTCGAGACTTAAGGAGATCGCAACATGGTAACACTAAGTTTTCACTACTCTCTCCCAACTTTCTATGTTCAATGGTGGCAACAATGTAACAAACCTGCAGGTCTAAACAAAACAACGCTGAGGAGTCGGATGCCAATGAACTTGAGAAACTTGAGGAACTCCTGACAAATGCTTTGAGGAATACGAAAGCCAAAAAGATGTTGGCAAAAGAAAACAATGGTGGTGCCGGTGCAAGTACAAGCAGCCAGATGTTGCTTTACTCGGCAGAGCGTGCAACCGACAAATGAAACTGTGCCGCTCCTTGCCGAACTTAAGCCCCGTTACGTTGTCGCACAAAGTTTATTTCC
GRMZM2G171650_T03 from maize genome v3
Amino Acid Sequence
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MAPRGRVELRRIEDKASRQVRFSKRRAGLFKKAFELALLCDAEVALLVFSPGGKLYEYSSSR
Nucleotide Sequence
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GCAGAGCGACGAGCGACGAGCTAAA...
GCAGAGCGACGAGCGACGAGCTAAACCCCGACCGAGTCGCTGCTTGGGTGCCCAAGATAGCCCTACCGCCTCGCCTCTCTCGTTCCCCCTCATCGCCACGCCAGTCGCCTCCACTCCCAGTCATCTCCCATCACCGACGACGTGTCGAGGCGAGAGAAGAGGGCGAGTCCAAGTCTAGGGTTCCCGCCGCATCGACACGGGCATCGCACCGCACCGCGAGGGGCGGGCACGGAGGAAGATGGCACCGCGCGGGCGCGTGGAGCTGCGGCGGATCGAGGACAAGGCGAGCCGGCAGGTGCGCTTCTCCAAGCGCCGCGCGGGGCTGTTCAAGAAGGCCTTCGAGCTGGCCCTGCTCTGCGACGCCGAGGTCGCGCTCCTCGTCTTTTCCCCCGGCGGCAAGCTCTATGAGTACTCCTCCTCCAGGTAGTTTGATGTGAAGTTCAAAGCATTGCTCTTTAATTGAATCAAAGAATCTCTTGAAACAAAGACATAGAAGATACATATGACCGCTATCATCAATTTGCGGGAGCAGGAAGAAAAGTGAACGGACATAACAACGATAACCGGGATGTAGCTGCTTCAGATTTACAGTCGAGACTTAAGGAGATCGCAACATGGTCTAAACAAAACAACGCTGAGGAGTCGGATGCCAATGAACTTGAGAAACTTGAGGAACTCCTGACAAATGCTTTGAGGAATACGAAAGCCAAAAAGATGTTGGCAAAAGAAAACAATGGTGGTGCCGGTGCAAGTACAAGCAGCCAGATGTTGCTTTACTCGGCAGAGCGTGCAACCGACAAATGAAACGGGGCGTGCATCTGTTGCTAACGGGGCGGTGCCGGTGCCGCATACTATTGTTGTGTAGCTGAGGTTTGTCAAGGTGGCTGCTGGCAAGGTTAGCCGAGGAAGTGGAGTTCAATAACAGGATGCGGAAACTGTGCCGCTCCTTGCCGAACTTAAGCCCCGTTACGTTGTCGCACAAAGTTTATTTCCTAGCACTGTGCTTGCTGCTTATGTTTGTTTGGATGTGCCAACCTGCAGTGACCCTCGTGGAGCCTGGGTCTCACGCTCCTCTTACCTAGTGTGATGTGCAGAAAAAGTGTGATGCTGTAAAATTATGTGATTGCCTAGCAGATGTCAAATTTTCAATCAGTAGCTAACTCCTTTTAATGGTACAGGCTTGCATGATTTCATCTGCAAAAAAGAGAGGGCGGGTTGGGTGTCAAATCTAGCCGGATGTTTTCGCAAGTTTGTGATAAAAATTGTGCTGTACACTTGTGTTTATGCAGTTGCCCTAGGCGTCAGTGGGCTGAAAGGTAATATCTGTGAATT
GRMZM2G171650_T04 from maize genome v3
Amino Acid Sequence
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MAPRGRVELRRIEDKASRQVRFSKRRAGLFKKAFELALLCDAEVALLVFSPGGKLYEYSSSRTGM
Nucleotide Sequence
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GCAGAGCGACGAGCGACGAGCTAAA...
GCAGAGCGACGAGCGACGAGCTAAACCCCGACCGAGTCGCTGCTTGGGTGCCCAAGATAGCCCTACCGCCTCGCCTCTCTCGTTCCCCCTCATCGCCACGCCAGTCGCCTCCACTCCCAGTCATCTCCCATCACCGACGACGTGTCGAGGCGAGAGAAGAGGGCGAGTCCAAGTCTAGGGTTCCCGCCGCATCGACACGGGCATCGCACCGCACCGCGAGGGGCGGGCACGGAGGAAGATGGCACCGCGCGGGCGCGTGGAGCTGCGGCGGATCGAGGACAAGGCGAGCCGGCAGGTGCGCTTCTCCAAGCGCCGCGCGGGGCTGTTCAAGAAGGCCTTCGAGCTGGCCCTGCTCTGCGACGCCGAGGTCGCGCTCCTCGTCTTTTCCCCCGGCGGCAAGCTCTATGAGTACTCCTCCTCCAGAACCGGGATGTAGCTGCTTCAGATTTACAGTCGAGACTTAAGGAGATCGCAACATGGTAACACTAAGTTTTCACTACTCTCTCCCAACTTTCTATGTTCAATGGTGGCAACAATGTAACAAACCTGCAGGTCTAAACAAAACAACGCTGAGGAGTCGGATGCCAATGAACTTGAGAAACTTGAGGAACTCCTGACAAATGCTTTGAGGAATACGAAAGCCAAAAAGATGTTGGCAAAAGAAAACAATGGTGGTGCCGGTGCAAGTACAAGCAGCCAGATGTTGCTTTACTCGGCAGAGCGTGCAACCGACAAATGAAACGGGGCGTGCATCTGTTGCTAACGGGGCGGTGCCGGTGCCGCATACTATTGTTGTGTAGCTGAGGTTTGTCAAGGTGGCTGCTGGCAAGGTTAGCCGAGGAAGTGGAGTTCAATAACAGGATGCGGAAACTGTGCCGCTCCTTGCCGAACTTAAGCCCCGTTACGTTGTCGCACAAAGTTTATTTCCTAGCACTGTGCTTGCTGCTTATGTTTGTTTGGATGTGCCAACCTGCAGTGACCCTCGTGGAGCCTGGGTCTCACGCTCCTCTTACCTAGTGTGATGTGCAGAAAAAGTGTGATGCTGTAAAATTATGTGATTGCCTAGCAGATGTCAAATTTTCAATCAGTAGCTAACTCCTTTTAATGGTACAGGCTTGCATGATTTCATCTGCAAAAAAGAGAGGGCGGGTTGGGTGTCAAATCTAGCCGGATGTTTTCGCAAGTTTGTGATAAAAATTGTGCTGTACACTTGTGTTTATGCAGTTGCCCTAGGCGTCAGTGGGCTGAAAGGTAATATCTGTGAATT
GRMZM2G171650_T05 from maize genome v3
Amino Acid Sequence
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MAPRGRVELRRIEDKASRQVRFSKRRAGLFKKAFELALLCDAEVALLVFSPGGKLYEYSSSSIEDTYDRYHQFAGAGRKV
NGHNNDNRDVAASDLQSRLKEIATWSKQNNAEESDANELEKLEELLTNALRNTKAKKMLAKENNGGAGASTSSQMLLYSA
ERATDK
Nucleotide Sequence
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GCAGAGCGACGAGCGACGAGCTAAA...
GCAGAGCGACGAGCGACGAGCTAAACCCCGACCGAGTCGCTGCTTGGGTGCCCAAGATAGCCCTACCGCCTCGCCTCTCTCGTTCCCCCTCATCGCCACGCCAGTCGCCTCCACTCCCAGTCATCTCCCATCACCGACGACGTGTCGAGGCGAGAGAAGAGGGCGAGTCCAAGTCTAGGGTTCCCGCCGCATCGACACGGGCATCGCACCGCACCGCGAGGGGCGGGCACGGAGGAAGATGGCACCGCGCGGGCGCGTGGAGCTGCGGCGGATCGAGGACAAGGCGAGCCGGCAGGTGCGCTTCTCCAAGCGCCGCGCGGGGCTGTTCAAGAAGGCCTTCGAGCTGGCCCTGCTCTGCGACGCCGAGGTCGCGCTCCTCGTCTTTTCCCCCGGCGGCAAGCTCTATGAGTACTCCTCCTCCAGCATAGAAGATACATATGACCGCTATCATCAATTTGCGGGAGCAGGAAGAAAAGTGAACGGACATAACAACGATAACCGGGATGTAGCTGCTTCAGATTTACAGTCGAGACTTAAGGAGATCGCAACATGGTCTAAACAAAACAACGCTGAGGAGTCGGATGCCAATGAACTTGAGAAACTTGAGGAACTCCTGACAAATGCTTTGAGGAATACGAAAGCCAAAAAGATGTTGGCAAAAGAAAACAATGGTGGTGCCGGTGCAAGTACAAGCAGCCAGATGTTGCTTTACTCGGCAGAGCGTGCAACCGACAAATGAAACGGGGCGTGCATCTGTTGCTAACGGGGCGGTGCCGGTGCCGCATACTATTGTTGTGTAGCTGAGGTTTGTCAAGGTGGCTGCTGGCAAGGTTAGCCGAGGAAGTGGAGTTCAATAACAGGATGCGGAAACTGTGCCGCTCCTTGCCGAACTTAAGCCCCGTTACGTTGTCGCACAAAGTTTATTTCCTAGCACTGTGCTTGCTGCTTATGTTTGTTTGGATGTGCCAACCTGCAGTGACCCTCGTGGAGCCTGGGTCTCACGCTCCTCTTACCTAGTGTGATGTGCAGAAAAAGTGTGATGCTGTAAAATTATGTGATTGCCTAGCAGATGTCAAATTTTCAATCAGTAGCTAACTCCTTTTAATGGTACAGGCTTGCATGATTTCATCTGCAAAAAAGAGAGGGCGGGTTGGGTGTCAAATCTAGCCGGATGTTTTCGCAAGTTTGTGATAAAAATTGTGCTGTACACTTGTGTTTATGCAGTTGCCCTAGGCGTCAGTGGGCTGAAAGGTAATATCTGTGAATT
Zm00001d042315_T001 from maize genome v4
Amino Acid Sequence
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MAPRGRVELRRIEDKASRQVRFSKRRAGLFKKAFELALLCDAEVALLVFSPGGKLYEYSSSRFRTPTPSS
Nucleotide Sequence
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ATGGCACCGCGCGGGCGCGTGGAGC...
ATGGCACCGCGCGGGCGCGTGGAGCTGCGGCGGATCGAGGACAAGGCGAGCCGGCAGGTGCGCTTCTCCAAGCGCCGCGCGGGGCTGTTCAAGAAGGCCTTCGAGCTGGCCCTGCTCTGCGACGCCGAGGTCGCGCTCCTCGTCTTTTCCCCCGGCGGCAAGCTCTATGAGTACTCCTCCTCCAGGTTCCGTACCCCTACCCCATCGTCGTAG
Zm00001eb143080_T002 from maize genome v5
Amino Acid Sequence
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MAPRGRVELRRIEDKASRQVRFSKRRAGLFKKAFELALLCDAEVALLVFSPGGKLYEYSSSSIEDTYDRYHQFAGAGRKV
NGHNNDNRDVAASDLQSRLKEIATWSKQNNAEESDANELEKLEELLTNALRNTKAKKVQ
Nucleotide Sequence
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AAACCCCGACCGAGTCGCTGCTTGG...
AAACCCCGACCGAGTCGCTGCTTGGGTGCCCAAGATAGCCCTACCGCCTCGCCTCTCTCGTTCCCCCTCATCGCCACGCCAGTCGCCTCCACTCCCAGTCATCTCCCATCACCGACGACGTGTCGAGGCGAGAGAAGAGGGCGAGTCCAAGTCTAGGGTTCCCGCCGCATCGACACGGGCATCGCACCGCACCGCGAGGGGCGGGCACGGAGGAAGATGGCACCGCGCGGGCGCGTGGAGCTGCGGCGGATCGAGGACAAGGCGAGCCGGCAGGTGCGCTTCTCCAAGCGCCGCGCGGGGCTGTTCAAGAAGGCCTTCGAGCTGGCCCTGCTCTGCGACGCCGAGGTCGCGCTCCTCGTCTTTTCCCCCGGCGGCAAGCTCTATGAGTACTCCTCCTCCAGCATAGAAGATACATATGACCGCTATCATCAATTTGCGGGAGCAGGAAGAAAAGTGAACGGACATAACAACGATAACCGGGATGTAGCTGCTTCAGATTTACAGTCGAGACTTAAGGAGATCGCAACATGGTCTAAACAAAACAACGCTGAGGAGTCGGATGCCAATGAACTTGAGAAACTTGAGGAACTCCTGACAAATGCTTTGAGGAATACGAAAGCCAAAAAGGTACAGTAAAATGCCTTTCTTTTACTACGTCATGTATCGTTGCGGCTGATGATTTAGATAGAGATCTCGCTCCAAAAACTTTTTGATACATTTTGTATTCCTATCCTGCGGACCAATTATTGCTACAATACTTTGGTGCATGGTTTT
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